BLASTN 2.2.3 [May-13-2002]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BA0AB033A11SP1|AL429676
(693 letters)
Database: Klactis 3X assemblage 11/02
1807 sequences; 10,358,551 total letters
Searching....done
Score E
Sequences producing significant alignments: (bits) Value
3x_Contig1578 321 2e-87
>3x_Contig1578
Length = 13178
Score = 321 bits (160), Expect = 2e-87
Identities = 172/175 (98%), Gaps = 2/175 (1%)
Strand = Plus / Plus
Query: 1 gatcctccaaactgcaatttattttgacatttttggtggtgttcctattaaatggggtgt 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 12449 gatcctccaaactgcaatttattttgacatttttggtggtgttcctattaaatggggtgt 12508
Query: 61 cagcatctgtcaaaactgatctctttacccccagaagttctgctctgaaaatcacacagg 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 12509 cagcatctgtcaaaactgatctctttacccccagaagttctgctctgaaaatcacacagg 12568
Query: 121 catgtacacaatcattggcatcggtagcaacatttcttgcaccgcgaaaaaggct 175
|||||||||||||||||||||||||||||||||| ||||||||||||||||||
Sbjct: 12569 catgtacacaatcattggcatcggtagcaacatt--ctgcaccgcgaaaaaggct 12621
Database: Klactis 3X assemblage 11/02
Posted date: Nov 27, 2002 12:23 PM
Number of letters in database: 10,358,551
Number of sequences in database: 1807
Lambda K H
1.39 0.713 1.32
Gapped
Lambda K H
1.39 0.713 1.32
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 6463
Number of Sequences: 1807
Number of extensions: 6463
Number of successful extensions: 169
Number of sequences better than 1.0e-20: 1
length of query: 693
length of database: 10,358,551
effective HSP length: 16
effective length of query: 677
effective length of database: 10,329,639
effective search space: 6993165603
effective search space used: 6993165603
T: 0
A: 40
X1: 5 (10.0 bits)
X2: 14 (28.0 bits)
S1: 12 (24.5 bits)
S2: 50 (100.7 bits)